Shinn AK, Bolton KW, Karmacharya R, Lewandowski KE, Yuksel C, Baker JT, Chouinard VA, Pingali SM, Bye H, Cederbaum K, Öngür D. McLean OnTrack: a transdiagnostic program for early intervention in first-episode psychosis. Early Interv Psychiatry. 2017 Feb; 11(1):83-90.

Lee PH, Baker JT, Holmes AJ, Jahanshad N, Ge T, Jung JY, Cruz Y, Manoach DS, Hibar DP, Faskowitz J, McMahon KL, de Zubicaray GI, Martin NH, Wright MJ, Öngür D, Buckner R, Roffman J, Thompson PM, Smoller JW. Partitioning heritability analysis reveals a shared genetic basis of brain anatomy and schizophrenia. Molecular Psychiatry. 2017. doi: 10.1038/mp.2017.42.

Wang D, Buckner RL, Fox MD, Holt DJ, Holmes AJ, Stoecklein S, Langs G, Pan R, Qian T, Li K, Baker JT, Stufflebeam SM, Wang K, Wang X, Hong B, Liu H. Parcellating cortical functional networks in individuals. Nat Neurosci, 2015; 18:1853-1860.

Shinn AK, Baker JT, Lewandowski KE, Ongur D, Cohen BM. Aberrant cerebellar connectivity in motor and association networks in schizophrenia. Frontiers in Human   Neuroscience, 2015; 9:134.

Brennan B, Tkachenko O, Schwab Z, Juelich R, Ryan E, Athey A, Pope H, Jenike M, Baker JT, Killgore W, Hudson J, Jensen E, and Rauch S. An examination of rostral anterior cingulate cortex function and neurochemistry in obsessive-compulsive disorder. Neuropsychopharmacology, 2015; 40:1866-1876.

Baker JT, Holmes AJ, Masters G, Krienen F, Yeo BT, Buckner RL, Ongur D. (2014) Disruption of cortical association networks in schizophrenia and psychotic bipolar disorder. JAMA Psychiatry, 2014; 71:109-118.

Shinn AK, Baker JT, Cohen BM, Ongur D. Functional connectivity of left Heschl’s Gyrus in vulnerability to auditory hallucinations in schizophrenia. Schizophr Res., 2013; 143:260-268.

Yüksel C, McCarthy JM, Shinn AK, Baker JT, Pfaff D, Heckers S, Renshaw P, Öngür D. Gray matter volume In schizophrenia and bipolar disorder with psychotic features. Schizophr Res., 2012; 138:177-182.

Other Peer-Reviewed Publications

Satterthwaite TD, Baker JT. How can studies of resting-state functional connectivity help us understand psychosis as a disorder of brain development? Curr Op Neurobio, 2015; 30C:85-91.

Torous J, Baker JT. Why psychiatry needs data science and data science needs psychiatry: Connecting with technology. JAMA Psychiatry. 2016; 73:3.

Torous J, Firth J, Mueller N, Onnela JP, Baker JT. Methodology and Reporting of Mobile Heath and Smartphone Application Studies for Schizophrenia. Harvard Review of Psychiatry. 2017; (3):146-154

Posters & Exhibits

Baker JT, Holmes AJ, Buckner RL, Ongur D. Disruption of the frontoparietal control network in schizophrenia.  Stanley Center Symposium on Emerging Genetics and Neurobiology of Severe Mental Illness, September 2013.

Shinn AK, Baker JT, Lewandowski KE, Cohen B, Öngür D. Abnormal Cerebro-Cerebellar Functional Connectivity in Schizophrenia. Biennial Resting State Functional Connectivity Conference, September 2014.

Baker JT, Masters GA, Ravichandran C, Buckner RL, Cohen B, Ongur D. Neural Correlates of a Five-factor Model of Psychosis. Society for Biological Psychiatry, May 2015.

Buckner RL, Braga R, Hutchinson M, Shermohammed M, Coombs G, Farfel L, Marotta M, Mair R, O’Keefe T, Meickle J, Liu H, Somerville L, Onnela JP, Baker JT. Deep Dynamic Phenotyping of the Individual: A Platform for Precision Neuroscience. Society for Neuroscience Conference, November 2016.

Baker JT, Pennant L, Baltrušaitis T, Vijay S, Liebson ES, Öngür D, Morency LP. Toward expert systems in mental health assessment: A computational approach to the face and voice in dyadic patient-doctor interactions. Partners Connected Health Symposium, October 2016

Wang D, Buckner RL, Öngür D, Baker JT, Liu H. Mapping Cortical Functional Networks in Individuals. American College of Neuropsychopharmacology Conference, January 2016.

Baker JT, Mueller N, Onnela JP, Öngür D, Buckner RL. Deep Dynamic Phenotyping: Measuring Fluctuations in Bipolar Disorder. Society for Biological Psychiatry, May 2017.